anhima
  • Locating samples and variants
  • Genotypes
  • Allele frequencies
  • Site frequencies
  • Doubleton sharing
  • Linkage disequilibrium
  • Genetic distance
  • Principal components analysis
  • Multidimensional scaling
  • Trees
  • Pedigrees (families and crosses)
  • Input/output utilities
  • HDF5 utilities
  • Miscellaneous utilities
  • Simulations
 
anhima
  • Docs »
  • Overview: module code
  • Edit on GitHub

All modules for which code is available

  • anhima.af
  • anhima.dist
  • anhima.f2
  • anhima.gt
  • anhima.h5
  • anhima.io
  • anhima.ld
  • anhima.loc
  • anhima.mds
  • anhima.pca
  • anhima.ped
  • anhima.sf
  • anhima.sim
  • anhima.tree
  • anhima.util

© Copyright 2014, Alistair Miles <alimanfoo@googlemail.com>, University of Oxford.

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